Hi Chris, at this point, the software does not split the SCP into its left and right parts. But, you definitely gave me something to think about. When I have the time, I'll try to work on this and release a patch. Cheers, Eugenio

Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu

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From: "Chris Steward" csteward@unimelb.edu.au To: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu Sent: Thursday, December 10, 2015 1:53:58 AM Subject: [Freesurfer] Brainstem Substructures in Freesurfer 6.0 - how to calculate left/right volumes

Hello,

I've installed Freesurfer 6.0 beta, and run the -brainstem-structures option to recon-all.

The results look ok, but I'd like the left/right volumes for the superior cerebellar peduncle (SCP), rather than the total volume. Is there any easy way to do this?

Thanks, Chris

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