Hi Bruce, When you say "manual interactions" are you referring to the manual troubleshooting of the talairach transform, skull stripping and intensity normalization?
Thanks, Tracy
Hi Alex,
that was a prerelease version. The subcortical stuff seems fine, but we have fixed a couple of small bugs in other things, so we are going to recommend that people rerun things with the new official release that we are hoping to be done with soon (note that rerunning won't involve any manual interactions).
Bruce
On Tue, 13 Sep 2005, Fornito, Alexander wrote:
I thought the recent version, eg., freesurfer-Linux-rh7.3-dev20050912-
full.tar.gz didthe subcortical segmentation. I've run it on a couplde of brains so far and it seems to beok. Are there still some bugs with it?
-----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Tue 9/13/2005 5:45 AM To: Bosky Ravindranath Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] subcortical segmentation
not quite, sorry. We *really* don't want to release a version with major problems, so we've been going through everything repeatedly trying to
catch
everything. We're getting there.
Bruce
On Mon, 12 Sep 2005, Bosky Ravindranath wrote:
To Bruce Fischl and List, I just wanted to know if the subcortical segmentation feature has been released. Thanks, Bosky
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Tracy Wang Research Assistant Cognitive Neuroscience Laboratory
Washington University Department of Psychology, Campus Box 1125 One Brookings Drive St. Louis MO 63130-4899 314-935-5019 twang@artsci.wustl.edu
yes, exactly
On Mon, 12 Sep 2005, Tracy Wang wrote:
Hi Bruce, When you say "manual interactions" are you referring to the manual troubleshooting of the talairach transform, skull stripping and intensity normalization?
Thanks, Tracy
Hi Alex,
that was a prerelease version. The subcortical stuff seems fine, but we have fixed a couple of small bugs in other things, so we are going to recommend that people rerun things with the new official release that we are hoping to be done with soon (note that rerunning won't involve any manual interactions).
Bruce
On Tue, 13 Sep 2005, Fornito, Alexander wrote:
I thought the recent version, eg., freesurfer-Linux-rh7.3-dev20050912-
full.tar.gz didthe subcortical segmentation. I've run it on a couplde of brains so far and it seems to beok. Are there still some bugs with it?
-----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Tue 9/13/2005 5:45 AM To: Bosky Ravindranath Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] subcortical segmentation
not quite, sorry. We *really* don't want to release a version with major problems, so we've been going through everything repeatedly trying to
catch
everything. We're getting there.
Bruce
On Mon, 12 Sep 2005, Bosky Ravindranath wrote:
To Bruce Fischl and List, I just wanted to know if the subcortical segmentation feature has been released. Thanks, Bosky
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Tracy Wang Research Assistant Cognitive Neuroscience Laboratory
Washington University Department of Psychology, Campus Box 1125 One Brookings Drive St. Louis MO 63130-4899 314-935-5019 twang@artsci.wustl.edu
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Tracy Wang