Hi!

I may be missing something basic but when I enter:

recon-all -s bert -autorecon1

I get:

FREESURFER_HOME: Undefined variable.

But I have already ran:

setenv FREESURFER_HOME /Applications/freesurfer

so that FREESURFER_HOME should be defined, right? I'm not sure if I'm missing something basic or something is completely wrong.

I can access the already created files but it doesn't let me run a recon-all for some reason.

Thanks for your help! Carl