Hi Alex, you can't do that with tksurfer. You will have to run mri_surfcluster to create a new overlay with clusters smaller than 50 removed. doug ps. Please send emails to the FS list and not directly to me. thanks!
On 12/14/2012 02:17 PM, Alex Hanganu wrote:
Dear Douglas,
I am using tksurfer for analysing the results.
Can you pleasetell me - what flag should I use in order to limit the minimalthreshold of clusters to a certain number of voxels ? For example if I want to show only those significant clusters, which have at least 50 voxels.
I couldn't find this answer in the wiki.
Thanks !!
Sincerely,
Alex.
Thanks Douglas !
OK !!
Alex.
Le 14/12/2012 2:27 PM, Douglas N Greve a écrit :
Hi Alex, you can't do that with tksurfer. You will have to run mri_surfcluster to create a new overlay with clusters smaller than 50 removed. doug ps. Please send emails to the FS list and not directly to me. thanks!
On 12/14/2012 02:17 PM, Alex Hanganu wrote:
Dear Douglas,
I am using tksurfer for analysing the results.
Can you please tell me - what flag should I use in order to limit the minimal threshold of clusters to a certain number of voxels ? For example if I want to show only those significant clusters, which have at least 50 voxels.
I couldn't find this answer in the wiki.
Thanks !!
Sincerely,
Alex.
freesurfer@nmr.mgh.harvard.edu
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Alex Hanganu -
Douglas N Greve