External Email - Use Caution
Hi,
I have processed two subjects data twice, once using T1w only and once including FLAIR. I haven't been able to achieve good coverage of the temporal lobe (see images) with either method for one patient, slightly better performance with the other. Is there anything else I could do to avoid manual segmentation? Thanks for any help.
All the best John
[cid:image001.png@01D4C466.65698730] [cid:image002.png@01D4C466.E0378430]
hard to tell from those images what is happening. Can you send an image with an arrow pointing to where the problem is? Putting the brain right-side-up will be helpful as well
On 2/14/19 8:12 AM, John Mc Fadden wrote:
External Email - Use Caution
Hi,
I have processed two subjects data twice, once using T1w only and once including FLAIR. I haven’t been able to achieve good coverage of the temporal lobe (see images) with either method for one patient, slightly better performance with the other. Is there anything else I could do to avoid manual segmentation? Thanks for any help.
All the best
John
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
External Email - Use Caution
Hi Douglas,
Here are the rotated images
[cid:image001.png@01D4C929.4984D070]
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Greve, Douglas N.,Ph.D. Sent: 14 February 2019 16:36 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Sections of Temporal Lobe not included
hard to tell from those images what is happening. Can you send an image
with an arrow pointing to where the problem is? Putting the brain
right-side-up will be helpful as well
On 2/14/19 8:12 AM, John Mc Fadden wrote:
External Email - Use Caution
Hi,
I have processed two subjects data twice, once using T1w only and once
including FLAIR. I haven't been able to achieve good coverage of the
temporal lobe (see images) with either method for one patient,
slightly better performance with the other. Is there anything else I
could do to avoid manual segmentation? Thanks for any help.
All the best
John
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Is there a defect in those regions? https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TopologicalDefect_freev...
On 2/20/19 9:33 AM, John Mc Fadden wrote:
External Email - Use Caution
Hi Douglas,
Here are the rotated images
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Greve, Douglas N.,Ph.D. Sent: 14 February 2019 16:36 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Sections of Temporal Lobe not included
hard to tell from those images what is happening. Can you send an image
with an arrow pointing to where the problem is? Putting the brain
right-side-up will be helpful as well
On 2/14/19 8:12 AM, John Mc Fadden wrote:
External Email - Use Caution
Hi,
I have processed two subjects data twice, once using T1w only and once
including FLAIR. I haven’t been able to achieve good coverage of the
temporal lobe (see images) with either method for one patient,
slightly better performance with the other. Is there anything else I
could do to avoid manual segmentation? Thanks for any help.
All the best
John
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
freesurfer@nmr.mgh.harvard.edu
-
Greve, Douglas N.,Ph.D. -
John Mc Fadden