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Dear FreeSurfer experts,
I am running longitudinal processing with FreeSurfer 7.1.0 on MacOX Catalina. The dataset is 5 time points with T1 data. I tried to run a single subject. So far it succeeded on Step 1 (recon-all at each time point), and Step 2 (-base to build the template), all of them reported successfully. But I failed at step3, recon-all -long, to compare each timepoint with the template. The log file is attached. I tried to run several times with different timepoints data, all reported the same stuff. My guess is at the last 9 row, reported that the cp command incorrectly. But I still have no idea to fix it, or maybe I need to go to freesurfer's script file? I have no idea...
Thanks for you time and help in advance! Stay safe and sound!
Best, Jieyin