Re: [Freesurfer] Re recon -all

Looks like you have an incorrect space after the word recon

On Sep 28, 2018, at 1:35 PM, Miguel Ángel Rivas Fernández miguelrivasfdez@gmail.com wrote:

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Hi Freesurfer devs,

I tried to re run the recon -all after put some control points in the brainmask and I get the following error:

pcpb3846:~ lab1-rmn$ recon -all -autorecon2-cp -autorecon3 -4025 cp_before -bash: recon: command not found

What could be the problem? The Freesurfer version that I am using at this moment is freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c

Thanks in advance,

Best,

Miguel Ángel Rivas Fernández _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer