HI Natalia
can you try the dev version? I'm pretty sure I fixed this. You can just rerun mris_ca_label. We'll hopefully be cutting a new stable 6 sometime soon
cheers Bruce
On Wed, 9 Dec 2015, Zaretskaya, Natalia wrote:
Dear all,
I am running recon-all with FreeSurfer 6 stable version on launchpad and have it exiting with errors with all of my 43 brains, always at the same stage (-cortparc). The same brains used to run through recon-all smoothly with the dev version just a month or so ago, and I am not doing anything essentially different than before, except using FreeSurfer 6, so I am wondering what’s wrong. The output of recon-all before the error looks o.k.
I attached an example recon-all.log file.
Many thanks in advance for your help! Natalia