yes, that is correct. I'm attaching some power point slides that show a block diagram of the new stream.
doug
Clifford A. Smith, PhD wrote:
With the most recent release, does the skullstripping take place with brainmask.auto.mgz and brainmask.mgz? After completing recon-all -autorecon-all I checked brain.mgz. I had some frontal areas missing, so ran recon-all -skullstrip -wsthresh 30. Brainmask.mgz looks good.
I believe that I know the answer, but to be safe, after running -autorecon2 brain.mgz will reflect these edits? Thanks, Cliff
Clifford Smith, PhD Assistant Professor of Behavioral Sciences Rush University Medical Center 312.942.2893
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