Dear Josephine, This is unusual. Could it be possible that you are running out of RAM memory? Do you have 16GB or more available? Cheers, /Eugenio
On 11 Jun 2021, at 01:39, 林鈺庭 <ytlin923@g.ntu.edu.twmailto:ytlin923@g.ntu.edu.tw> wrote:
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Dear Developer and Eugenio,
We encounter the error at the end of the analysis,it looks like this:
Smoothing mesh collection with kernel size 0.750000 .../usr/local/freesurfer/bin/run_segmentSubjectT1_autoEstimateAlveusML.sh: line 40: 499 Killed /usr/local/freesurfer/bin/segmentSubjectT1_autoEstimateAlveusML S013 /data 0.333333333333333333333333333333333333 /usr/local/freesurfer/average/HippoSF/atlas/AtlasMesh.gz /usr/local/freesurfer/average/HippoSF/atlas/AtlasDump.mgz /usr/local/freesurfer/average/HippoSF/atlas/compressionLookupTable.txt 0.05 right L-BFGS v21 '/usr/local/freesurfer/bin/fs_run_from_mcr /usr/local/freesurfer/bin/' 0 Linux f8e6a6f8a44a 5.10.25-linuxkit #1 SMP Tue Mar 23 09:27:39 UTC 2021 x86_64 x86_64 x86_64 GNU/Linux
T1 hippocampal subfields exited with ERRORS at Thu Jun 10 10:22:54 UTC 2021
I've attached the log file here, could you help us with this error? Thank you so much!
Best regards, Josephine <hippocampal-subfields-T1.log>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer