Do you have a .license file in your /Applications/freesurfer directory?
If so try making a copy of it and calling it license.txt and try again. If that still doesnt work please email me your .license file TO MY PERSONAL EMAIL ADDRESS, NOT THE FREESURFER LIST. Thanks.
-Zeke
On 04/13/2016 01:38 PM, stdp82@virgilio.it wrote:
Hi list,
please see the error reported below. It occurs when I invoke tksurfer.
Of note, I have completed without problem fs-fast analysis without error.
The .license file is well placed and written.
Thanks
Stefano
tksurfer fsaverage rh inflated -aparc -overlay subj/rest/fc.ROI.surf.rh/ROI/sig.nii.gz -fminmax 1.3 3
thresholds min=1.3 max=3 slope=0.588235 mid=2.15
subject is fsaverage
hemi is rh
surface is inflated
surfer: current subjects dir: /Applications/freesurfer/subjects/subject_prova
surfer: not in "scripts" dir ==> using cwd for session root
surfer: session root data dir ($session) set to:
surfer: /Applications/freesurfer/subjects/fMRI/con_run1
checking for nofix files in 'inflated'
Reading image info (/Applications/freesurfer/subjects/subject_prova/fsaverage)
Reading /Applications/freesurfer/subjects/subject_prova/fsaverage/mri/orig.mgz
surfer: Reading header info from /Applications/freesurfer/subjects/subject_prova/fsaverage/mri/orig.mgz
ERROR: FreeSurfer license file /Applications/freesurfer/.license not found.
If you are outside the NMR-Martinos Center,
go to http://surfer.nmr.mgh.harvard.edu to
get a valid license file (it's free).
If you are inside the NMR-Martinos Center,
make sure to source the standard environment.
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