Hi,
I have just downloaded and I thought installed freesurfer on a Debian system (Debian 3.2.51-1 x86_64 GNU/Linux). However when I go to test the install by typing in freeview (or any other command) in the terminal window I get the following:
% freeview freeview: Command not found.
Before doing this, I added my license key to a .license file in the freesurfer directory. I had also previously set up the environment as follows:
% setenv FREESURFER_HOME /Data/freesurfer % source $FREESURFER_HOME/SetUpFreeSurfer.csh -------- freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 -------- Setting up environment for FreeSurfer/FS-FAST (and FSL) FREESURFER_HOME /Data/freesurfer FSFAST_HOME /Data/freesurfer/fsfast FSF_OUTPUT_FORMAT nii.gz SUBJECTS_DIR /Data/freesurfer/subjects MNI_DIR /Data/freesurfer/mni
When I type freesurfer in the terminal window I am told that:
You are running this version of FreeSurfer:
freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0
_____ Can you help me figure out why I can't get freesurfer to run?? I have previously been able to install and use freesurfer on a different computer running Unbuntu.
Many Thanks,
Laura