External Email - Use Caution
Hi Bruce,
Thanks for your response. Is it also fine for fsaverage5 surface or I need to switch my data to fsaverage?
Thanks,
Sincerely,
Loïc
Le lun. 20 mai 2019 à 15:52, Bruce Fischl fischl@nmr.mgh.harvard.edu a écrit :
Hi Loic
if you are on the fsaverage surface you can save the -log10(p) values using save_mgh.m, then load them in freeview and threshold them or whatever
cheers Bruce On Mon, 20 May 2019, Loïc Daumail wrote:
External Email - Use CautionAlso, one more thing:
My data is on fsaverage5 resolution.
Thanks in advance,
Sincerely,
Loïc
Le lun. 20 mai 2019 à 09:49, Loïc Daumail loic.daumail@gmail.com a
écrit :
Dear Freesurfer community,I obtained score matrices of surfaces after performing diffusion
embedding map on fMRI data.
I am now using the SurfStat toolbox(Matlab) in order to obtain p-value
maps to compare between
two groups.
After obtaining the p-value map, I would like to label the surface in
order to identify the
regions of significant difference between both groups.
Would it be possible to use Freview in order to do it? If so, which format should I use for my SurfStatP output p-value map? How would you do it, (tools to convert into a specific format, surfaces
and atlas to load on
Freeview, which format for those ones)? I would be very grateful if you could detail a bit, as I am new to these
tools!
Thanks in advance,
Loïc Daumail
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