External Email - Use Caution
Hello Camila, Did you try using the script fs_install_mcr, e.g., in the linux 7.2.0 release as freesurfer/7.2.0/bin/fs_install_mcr to install Matlab R2014b ? Please note that there is a currently an issue with running it on M1 Macs. - R.
On Oct 1, 2021, at 15:51, Camila Fernandes da Silva <camila.fernandes.silva@usp.br> wrote: External Email - Use Caution Hey, I'm totally new into Freesurfer and I need some help with my Matlab.I tried to do "recon-all -s <.....>/ -lgi But as you can see, It shows an error related to matlab...I tried everything! But nothing is working.I have heard that we should modify the startup.m file...But, what am I supposed to do with it?I'm using the Freesurfer 7.1.0 version-----------------------------------------------------------------------#@# Local Gyrification Index lh Fri Oct 1 15:25:01 EDT 2021 mris_compute_lgi --i lh.pial matlab: Command not found.matlab5: Command not found.ERROR: Matlab is required to run mris_compute_lgi!Command exited with non-zero status 1@#@FSTIME 2021:10:01:15:25:01 mris_compute_lgi N 2 e 0.01 S 0.00 U 0.01 P 94% M 2784 F 0 R 736 W 0 c 11 w 15 I 0 O 0 L 0.05 0.12 0.10@#@FSLOADPOST 2021:10:01:15:25:01 mris_compute_lgi N 2 0.05 0..12 0.10Linux developer-VirtualBox 5.4.0-87-generic #98~18.04.1-Ubuntu SMP Wed Sep 22 10:45:04 UTC 2021 x86_64 x86_64 x86_64 GNU/Linuxrecon-all -s controle01_T1 exited with ERRORS at Fri Oct 1 15:25:01 EDT 2021For more details, see the log file /home/developer/freesurfer/controle01_T1/scripts/recon-all.logTo report a problem, see MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://secure-web.cisco.com/1vxWcbz-IO91ksjI-7f0BIIkVTrTYBYHERFTGDyuERIrU6am... FernandesLicenciatura em Física - IFUSP_______________________________________________Freesurfer mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer