Hello,
I have a question about propagating changes to segmentation. Once I have saved my edits what is the appropriate command to propagate these changes for both cortical and subcortical changes that I have made.
The workflow instructs that after segmentation edits are made to run
-normalization -maskbfs -segmentation -autorecon2-wm -autorecon3 to the wm. mgz file. However the instructions indicate to open brainmask.mgz to make edits. Should I make changes on the wm.mgz file?
Any clarification on this topic would be much appreciated.