17 Jul
2013
17 Jul
'13
9:50 a.m.
Hello,
I have a question about propagating changes to segmentation. Once I have saved my edits what is the appropriate command to propagate these changes for both cortical and subcortical changes that I have made.
The workflow instructs that after segmentation edits are made to run
-normalization -maskbfs -segmentation -autorecon2-wm -autorecon3 to the wm. mgz file. However the instructions indicate to open brainmask.mgz to make edits. Should I make changes on the wm.mgz file?
Any clarification on this topic would be much appreciated.
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Liane Hunter
MD/Ph.D Candidate
Albert Einstein College of Medicine