Hi Sharmili,
this is not an error message. It is sampling the volume label coords onto the surface. What happens next? Does tksurfer display the label?
cheers, Bruce
On Wed, 29 Jul 2009, Sharmili 57 wrote:
Hi ! Thats all it says. The window with the inflated brain shuts down, as soon as i load the labe. But i don't get an error message.
ssrithar@beo-01:/data/Psychiatrie/01_Projects_Folder/DA_Sritharan/Freesurfer $ t ksurfer FASC rh inflated surfer: current subjects dir: /data/Psychiatrie/01_Projects_Folder/DA_Sritharan/ Freesurfer surfer: not in "scripts" dir ==> using cwd for session root surfer: session root data dir ($session) set to: surfer: /data/Psychiatrie/01_Projects_Folder/DA_Sritharan/Freesurfer surfer: Reading header info from /data/Psychiatrie/01_Projects_Folder/DA_Srithar an/Freesurfer/FASC/mri/T1.mgz surfer: vertices=147680, faces=295356 Loading /apps/prod/i686/freesurfer-4.4.0/surface_labels.txt surfer: ### redraw failed: no gl window open surfer: single buffered window surfer: tkoInitWindow(FASC) surfer: using interface /apps/prod/i686/freesurfer-4.4.0/lib/tcl/tksurfer.tcl Reading /apps/prod/i686/freesurfer-4.4.0/lib/tcl/tkm_common.tcl Reading /apps/prod/i686/freesurfer-4.4.0/lib/tcl/tkm_wrappers.tcl Reading /apps/prod/i686/freesurfer-4.4.0/lib/tcl/fsgdfPlot.tcl Reading /apps/prod/i686/freesurfer-4.4.0/lib/tcl/tkUtils.tcl Successfully parsed tksurfer.tcl reading white matter vertex locations... % /data/Psychiatrie/01_Projects_Folder/DA_Sritharan/Freesurfer/FASC/label/tfusif orm.rh.label /data/Psychiatrie/01_Projects_Folder/DA_Sritharan/Freesurfer/FASC/l abel/tfusiform.rh.label ******************** 2107 nonzero vertices found ******************** 2107 unassigned vertices in label - building spatial LUT... assigning vertex numbers to label...
Thanks for your help
Sharmili
Date: Wed, 29 Jul 2009 07:59:05 -0400 From: fischl@nmr.mgh.harvard.edu To: sharmili75@hotmail.com Subject: Re: loading label in tksurfer
Hi Sharmali,
can you just send us the text output in your email message instead of an image? That would be much more helpful.
thanks Bruce On Wed, 29 Jul 2009, Sharmili 57 wrote:
From: sharmili75@hotmail.com To: freesurfer@nmr.mgh.harvard.edu Date: Mon, 27 Jul 2009 22:54:21 +0000 Subject: [Freesurfer] FW: loading label in tksurfer
Hi !
I've edited a label in tkmedit and now I want to open it with tksurfer, but I get the following error message.
Could anyone help me?
Best Sharmili
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