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Dear Jaime, This is indeed a funny error. The left side runs to completion, and then the right side dies right away… Is the problem reproducible? Does it happen with other subjects, too? Kind regards, /Eugenio
-- Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Jaime Gomez borriquear@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Wednesday, 29 May 2019 at 03:52 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] longitudinal subfields exited with ERRORS
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Hello FreeSurfer Developers,
I'm trying to run segmentHA_T1_long.sh
ERROR: MATLAB is exiting because of fatal error /Applications/freesurfer/bin/run_SegmentSubfieldsT1Longitudinal.sh: line 37: 49858 Killed: 9 "${exe_dir}"/SegmentSubfieldsT1Longitudinal.app/Contents/MacOS/SegmentSubfieldsT1Longitudinal $args Darwin jaimes-Mac-Pro.local 18.2.0 Darwin Kernel Version 18.2.0: Fri Oct 5 19:41:49 PDT 2018; root:xnu-4903.221.2~2/RELEASE_X86_64 x86_64
longitudinal subfields exited with ERRORS at Tue May 28 17:53:02 CEST 2019
I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, Ive attached the recon-all.log in case it's of any use.
1) freesurfer-darwin-OSX-ElCapitan-dev-20190328-6241d26
2) Platform: macOS 10.14.1 (18B75)
3) Darwin jaimes-Mac-Pro.local 18.2.0 Darwin Kernel Version 18.2.0: Fri Oct 5 19:41:49 PDT 2018; root:xnu-4903.221.2~2/RELEASE_X86_64 x86_64:16 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux
4) long-hippocampal-subfields-T1.log: see attached