External Email - Use Caution
Yes,I want to compute them in standard space.But I don't know which atlas I should use? > -----原始邮件----- > 发件人: "Tim Schäfer" ts+ml@rcmd.org > 发送时间: 2021-10-08 15:27:32 (星期五) > 收件人: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu > 抄送: > 主题: Re: [Freesurfer] Confusion about mean CT measures after registration > > External Email - Use Caution > > Oh sorry, ignore my last mail, I misread your question. aparcstats2table will compute the values for native space, and if I interpret your email correctly, you want them in standard space. > > Sorry for the confusion, > > Tim > > > On 10/08/2021 8:28 AM Dongyue Zhou zhoudongyue@mail.dlut.edu.cn wrote: > > > > > > External Email - Use Caution > > > > Dear FreeSurfer experts: > > > > I use the command recon-all qcache to get filesub_01/surf/lh.thickness.fwhm10.fsaverage.mgh file. > > > > I want to know mean CT measures of every ROI after registraion in one subject. And I know mean CT is calculated by dividing CT of all vertices by the number of vertices. > > > > Can I use fsaverage/label/?.annot as atlas to calculate mean cortical thickness of every ROI directly? > > > > Or should I transfer sub_01/label/?.annot to fsaverage ? > > > > > > _______________________________________________ > > Freesurfer mailing list > > Freesurfer@nmr.mgh.harvard.edu > > https://secure-web.cisco.com/1KeWlEN2ywg3XWmiIk51vJenarixEySvruOwlAqz3ANW8se... > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://secure-web.cisco.com/1W5AoPa8JwbrRW7FK22qRJFVBmTfXKQoE5U1THFZhm_4fFg...