Do you mean from the mri_gtmpvc command line? There is not. The value you want will be stored in aux/global.gmwmcsf.dat, so, once you had that value, you could rescale the values in the .dat file
On 5/20/2020 3:33 PM, Vicky Shi wrote:
External Email - Use Caution
Dear Freesurfer experts,
I am using gtm.stats.dat file generated by command mri_gtmpvc. I want it scaled by the mean intensity of whole brain. Is there an easy way to achieve this?
Thank you in advance for your help.
Best regards, Vicky
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer