Hi All
I am trying to run a subject in 6.0 (it ran perfectly well in 5.3) and it stops when trying to transform to the "conformed" space. I get the following error after about a minute. I have not seen this error before.
mri_convert ./tmp.mri_nu_correct.mni.2860/nu1.mnc orig_nu.mgz --like orig.mgz --conform mri_convert.bin ./tmp.mri_nu_correct.mni.2860/nu1.mnc orig_nu.mgz --like orig.mgz --conform ncopen: filename "./tmp.mri_nu_correct.mni.2860/nu1.mnc": Not a netCDF file miopen: MINC package entry point Error opening ./tmp.mri_nu_correct.mni.2860/nu1.mnc mincRead(): error reading volume from file ./tmp.mri_nu_correct.mni.2860/nu1.mnc $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.2860/nu1.mnc... Linux kaplan 3.13.0-105-generic #152-Ubuntu SMP Fri Dec 2 15:37:11 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s icbm-131 exited with ERRORS at Thu Feb 23 11:40:53 EST 2017
To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
Any ideas?
Best
Trisanna -- Ph.D. Candidate McGill University Integrated Program in Neuroscience Psychology