The full error msg is not in the subject line. My guess is that the "lh." in front of "Yeo" in the srcsurfval is causing the problem
On 10/23/2013 03:17 PM, Paul Beach wrote:
Hello FS experts,
I'm attempting to transform the Yeo2011 annotations (lh & rh) from fsaverage to individual subjects so as to then sample the cortical maps to subject surfaces using mri_label2vol. However, I'm getting the error in the subject line when I put in the following commands:
/mri_surf2surf --srcsubject fsaverage / /--srcsurfval lh.Yeo2011_17Networks_N1000.annot / /--trgsubject HS_001 --trgsurfval lh.Yeo_17Network_native.annot --hemi lh/
I suspected that I have to put a src_type and trg_type in there, but I wasn't sure what type of types would be appropriate for use in mri_label2vol. For the latter command I was planning on utilizing something similar to a previous e-mailer's command (below): /mri_label2vol --annot lh.Yeo2011_17Networks_N1000.HS_001.annot / /--o outfile.nii.gz --hemi lh --subject HS_001 / /--temp $SUBJECTS_DIR/HS_001/mri/orig.mgz --identity/
Any suggestions for getting past this error?
Thanks for your help, Paul -- Paul Beach DO/PhD candidate - Year VI Michigan State University
- College of Osteopathic Medicine
- Neuroscience Program
- Bozoki Lab: Neurology/Radiology
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