You can manually edit them to restore the parts that have been stripped (using the clone feature in freeview). See https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/SkullStripFix_freeview
On 1/27/2023 5:21 AM, Rakshathi Basavaraju wrote:
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Dear FS,
A few of my brainmasks were excessively stripped and I used watershedding to correct them. Many I could set right. But a few scans despite playing around with different h values if I cannot restore the cut parts of the brainmask what is to be done in that case? Should I discard the same?
Thanks, Dr. Rakshathi Basavaraju (M.D. Psychiatry) Assistant Professor (Department of Health Research-sponsored return-home research fellowship) Principal Investigator - OPCINSS Department of Psychiatry National Institute of Mental Health and Neurosciences (NIMHANS) Bengaluru, Karnataka, India-560029 Phone: +91-9480829898/+91-80-26972156/+91-80-26995320
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