Thanks for the reply.
freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0.
I opened it with fslview and it looks like a normal 3-dimentional file.
Thanks Francesca
2017-07-31 16:38 GMT+02:00 Douglas Greve greve@nmr.mgh.harvard.edu:
what version of FS are you running?
On 7/30/17 12:37 PM, Bruce Fischl wrote:
Hi Francesca
why is the nifti 5-dimensional? The code is complaining that it doesn't know how to intepret the input volume
cheers Bruce On Sun, 30 Jul 2017, Francesca Strappini wrote:
Hi, I'm trying to register to the surface a t-test map created with afni (3dttest++) but I got this error message:
mri_vol2surf --mov movierestTest.nii.gz --regheader fsaverage
--surf-fwhm 3
--hemi lh --o movierestTest_lh.nii.gz
srcvol = movierestTest.nii.gz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = lh reshape = 0 interp = nearest float2int = round GetProjMax = 0 INFO: float2int code = 0 niiRead(): 5 dimensions in/media/francesca/DATA/
Shared/fmri-experiments/fc_categories/searchlight/tes
rest/movierestTest.nii.gz; unsupported Invalid argument ERROR: could not read movierestTest.nii.gz as type 24
Thanks Francesca
-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il
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