"mri_convert" just starts the man page for mri_convert. I have been looking at other things and 3D view in FSL also crashes with a 2657 segmentation fault and a core dump. I think the problem is in the virtualized 3D driver or something like that. It seems that CentOS 6.4 does have some problems with 3D. I use the latest vboxadditions 4.2.16. I dont think the error is Freesurfer. But ill dig deeper. Thank you for your time.
Best regards Rune
On Wed, Jul 10, 2013 at 4:29 PM, Z K zkaufman@nmr.mgh.harvard.edu wrote:
Rune,
I have not seen this error before. Can you please type mri_convert on the command line and tell me what, if any, output is produced.
-Zeke
On 07/10/2013 05:14 AM, Rune Frandsen wrote: I have just installed Freesurfer and wanted to try tkmedit I get a Segfault error and it asked me to write to this mail.
The .xdebug_tkmedit is
tkmedit started: Wed Jul 10 10:53:23 2013
/usr/local/freesurfer/tktools/**tkmedit.bin$Id: tkmedit.c,v 1.343 2011/03/01 01:41:22 nicks Exp $ $Name: stable5 $
Segfault Creating main window xDebug stack (length: 2) 01: main() 01: Creating main window 00: 00:
My system is a fresh install of CentOS 6.4 64bit installed in VirtualBox. The only other program installed is FSL. The base machine is a HP Envy dv6 i7 16GB with Win8 64bit.
Is this a known problem?
Best regards Rune Frandsen (MD, phd student) Danish Center for Sleep Medicine runefrandsen@gmail.com
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