Do you have read permission to the file? Also, you can convert straight to mgz, not need to use nii as an intermediate. doug
On 3/15/13 5:13 AM, Valtina Pouegue wrote:
Hi,
I have a problem of conversion. I would like to convert mnc file to mgz. But I think I shoul first convert mnc to nii then nii to mgz. , so I try the command mri_convert and I have this error;
[esther@m3012-04 ~]$ mri_convert $SUBJECTS_DIR/Patient1/fichierMnc.mnc Folder1.nii.gz mri_convert /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc Folder1.nii.gz $Id: mri_convert.c,v 1.179.2.7 2012/09/05 21:55:16 mreuter Exp $ reading from /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc... mincRead(): can't find file /home/esther/Freesufer/freesurfer/subjects/Patient1/fichierMnc.mnc [esther@m3012-04 ~]$
I look up, and the file is at the rith place.... Could you help me.. Thanks
VP ]
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer