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Hi Brady,
You can use: https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/registratio... You will have to use nearest neighbor interpolation since the parcels should have integer values.
Or you can try out the Schaefer parcellations ( https://github.com/ThomasYeoLab/CBIG/tree/master/stable_projects/brain_parce...) that were estimated in the fsaverage surface space, so it won't suffer from interpolation issues :)
Regards, Thomas
On Wed, Jun 19, 2019 at 11:31 AM Williamson, Brady < Brady.Williamson@cchmc.org> wrote:
External Email - Use CautionHello,
I am trying to convert parcellations in MNI space (BrainNetome and Craddock 200) to a surface annotation file in fsaverage space. I have seen several posts that seem to talk about steps that may be applicable but none of them are very efficient. Is there an easy/direct way to do this conversion? It seems like I am missing something really obvious, like a one line command, that would do the trick.
Thank you for any assistance, Brady
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