Hi,
We had never really finalized the QA Tools to feel comfortable distributing them, and so the permissions on these files are still set so that only the group of us working with them can use it. In fact, I had thought that the wiki page associated with it was likewise only available to those same people (to avoid this exact confusion). Our goal had been to incorporate these scripts into the FS distribution, but that hasn't happened yet. I'm no longer at the center, but I'm sure someone else can give you access to these - if you copy it to your own directory (i.e., don't use our only copy of the scripts).
Thanks, Jenni
On 10/9/07, Pratap Kunwar pkunwar@nmr.mgh.harvard.edu wrote:
hi all
I tried to use QA tools on the wiki (writen by jpacheco) at
https://surfer.nmr.mgh.harvard.edu/fswiki/QATools?action=highlight&value... .
I got the following error saying permission denied. I could not even copy the QATOOLS to my folder.
thanks pratap
[galen:S4_HR_LR18_recon] (nmr-std-env) setenv QA_SCRIPTS /space/tensor/17/users/jpacheco/QAtools [galen:S4_HR_LR18_recon] (nmr-std-env) $QA_SCRIPTS/data_checker/recon_checker -nocheckasegoutliers -s rfa1410 -o QAsnap.html /space/tensor/17/users/jpacheco/QAtools/data_checker/recon_checker: Permission denied.
FREESURFER_HOME: /usr/local/freesurfer/stable4 Build stamp: freesurfer-Linux-centos4_x86_64-stable-v4.0.1-20071006 RedHat release: CentOS release 4.4 (Final) Kernel info: Linux 2.6.9-42.0.3.ELsmp x86_64 NMR Center info (/space/freesurfer exists): machine: galen SUBJECTS_DIR: /autofs/space/galen_002/users/carl/S4_HR_LR18/S4_HR_LR18_recon/ PWD: /space/galen/2/users/carl/S4_HR_LR18/S4_HR_LR18_recon
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer