Re: [Freesurfer] Freeview issues with surfaces

Hi Pål

Thickness and curvature are overlays, not surfaces. Load a surface then load them as either overlays or curvature files.

Cheers Bruce

From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Pål Gunnar Larsson Sent: Monday, April 26, 2021 9:50 AM To: 'Freesurfer support list' freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Freeview issues with surfaces

External Email - Use Caution Thank you. In version 5 I could load an overlay with e.g. thickness. I don’t see that alternative in Freeview?

Pål not sensitive

Fra: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] På vegne av Wang, Ruopeng Sendt: 26. april 2021 15:42 Til: Freesurfer support list Emne: Re: [Freesurfer] Freeview issues with surfaces

Hi Pål,

lh.area and lh.thickness are not surface files. They can be loaded as a surface overlay like this:

freeview -f lh.pial:overlay=lh.thickness

Best, Ruopeng

On Apr 26, 2021, at 9:36 AM, Pål Gunnar Larsson <pall@ous-hf.nomailto:pall@ous-hf.no> wrote:

External Email - Use Caution

I have made a new install of everything, now running Ubuntu 20.04 with Virtualbox 6.0 and Freesurfer 7.1. Freesurfer crashes with : “nquads=10158084, nvertices=529 terminate called after throwing an instance of 'int' Aborted (core dumped)” If I try to open surface lh.area or lh.thickness. Others like lh.pial and lh.inflated works nicely.

I have tried this with one of “my” patients and bert with same result. Suggestions?

Pål

Pål G. Larsson M.D., PhD. not sensitive

_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurferhttps://secure-web.cisco.com/1jxM4XNRCDEY7pdeyMDxSEGnm_a53bxf9Z1OC9vLW-xj-DJeF1zUw8kn1lZkTX7ABIS8GBeF31KuMxO36rHaRrcsyo-LyycCP-YYdRv9y4OkTpbQqk3NMFPX4RCd_iNQ_rdQAW4lZg0xaUykRruG0_lMv4LZzRbpLyz8h5aziSIfPEF4uerlhdqoaNJTYDGoOTXVWEJ22r_bCKaZZ8gAKZ91YSqk_67aOFj0zs-KraAHVG4U2tcSjGASziPydDmX6tNcFegNVC28bg5ERaLjRUg/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer