It just looked noisy to me, but then again the images were pretty small
On 6/24/2021 12:00 PM, Rosalia Dacosta Aguayo wrote:
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Hi Douglas,
Whay do you exactly mean by low quality data? As far as I have been told, is high. I would like to know so I cam discuss it further with the engineers as we are at the very beggining of the acquisition.
Kind regards, Rosie
El jue., 24 jun. 2021 17:10, Douglas N. Greve <dgreve@mgh.harvard.edu mailto:dgreve@mgh.harvard.edu> escribió:
It looks like the data are fairly low quality. This will require some manual intervention (control points, fixing topologogical errors, etc). See our wiki on manual interventions On 6/15/2021 10:52 AM, Rosalia Dacosta Aguayo wrote:External Email - Use Caution Here is what I am referring to: * * On Mon, Jun 14, 2021 at 7:47 PM Rosalia Dacosta Aguayo <rdacostaa@gmail.com <mailto:rdacostaa@gmail.com>> wrote: Dear Freesurfer's experts, I have run recon-all all to one subject with fmriprep. The work finished without errors. However, after inspecting the results, I have seen that there are some *grey regions* (mainly frontal and temporal ones) that have not been fully covered. I wonder how I could proceed in order to improve the segmentation. Kind regards, Rosie _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1etwqsyHnmfZsEhKpy7DXXAMlcAoIzwgTV5glV36LtvSHIvXzmFhFqOO-omHziK6OVLyok0O-lKL0Psc8HQV0nI5A8iZZoSx5hp1EOfDhUHHUPiS1UDKPRH-y0DR1Zx_f2pBbStU_tp6TwlE_HgqCWfHKuGvMoLjeT_Ndq0PA4qGj4dk5ryldxyrzaFaCD29z8axwX7YZfEipIGC5-o6dZ0y8uKMAuAyprJHY6GlEpMonPlzh0KvIe-jmXyhm8u8rNYNhUxRtUZlpH4_Cl5eKPQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer>_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer <https://secure-web.cisco.com/1etwqsyHnmfZsEhKpy7DXXAMlcAoIzwgTV5glV36LtvSHIvXzmFhFqOO-omHziK6OVLyok0O-lKL0Psc8HQV0nI5A8iZZoSx5hp1EOfDhUHHUPiS1UDKPRH-y0DR1Zx_f2pBbStU_tp6TwlE_HgqCWfHKuGvMoLjeT_Ndq0PA4qGj4dk5ryldxyrzaFaCD29z8axwX7YZfEipIGC5-o6dZ0y8uKMAuAyprJHY6GlEpMonPlzh0KvIe-jmXyhm8u8rNYNhUxRtUZlpH4_Cl5eKPQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer> The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at *MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be* http://www.massgeneralbrigham.org/complianceline <http://secure-web.cisco.com/1Tr88SrERL7Fd0OUfLDWjjmD1DdjAycNYd2czIAJ_GnnfzVcck3uydzHjWCJYSfuTBPBGJRlasRe3qx5FZ3T6PNQw_bioIFQPBc39_DdCIF4elDKLaRScULCaNDiSSoOhyOjVaqgPUXrO8OgAjPQXhOA3Be1yUYbngFH1tjSF7LCVGdkej4so-nwARic6CAQfyNRecQDP85HWuN4vx5EpG4xsJYkqSGpxS3ytqUZwUS-lZXtPzu-SguK7onbW6E8supqJax_Y35lgfbLH9yT_EA/http%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline> . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
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