Re: [Freesurfer] recon-all image output

Hi Michele, have you gone through trouble shooting steps described on our wiki yet?

doug

Michele Placci wrote:

2010/7/23 Michele Placci <michele.placci@gmail.com mailto:michele.placci@gmail.com>

Dear experts, we run this command in a file of MRI 3D .nii :

    recon-all -force -all -notal-check -i
/my_directory_input/my_file.nii -subjid my_directory_output

and i get the attached image of output for a single time point,
after 40 hours of elaboration.
We don't understand why there isn't the right side of the brain.
Normal processing time is so high?
What can I centre this image?


Any suggestions?


2010/7/21 Michele Placci <michele.placci@gmail.com
<mailto:michele.placci@gmail.com>>

    Dear experts, we run this command in a file of MRI 3D .nii :

        recon-all -force -all -notal-check -i
    /my_directory_input/my_file.nii -subjid my_directory_output

    and i get the attached image of output for a single time
    point, after 40 hours of elaboration.
    We don't understand why there isn't the right side of the brain.

    Any suggestions?

    Thank you all.

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