Not sure what you mean by the background. You can try binarizing the electrodes (mri_binarize), then load it as a segmentation.
On 12/8/2023 5:47 PM, Datta, Aditya wrote:
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Hi,
Is there any way to clear background for a volume file from the command line. I am attempting to overlay electrodes onto a T1 image, and I would like for the background of the electrode files to be clear when they are loaded from a script.
Thanks,
*Aditya Datta* /Staff Research Associate II/ /UCLA Department of Neurosurgery/ /670 Charles E. Young Dr. South, CHS 63-360/ /Los Angeles , CA 90095/ /650-435-9337/ / /
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