Dear Ajay, All outputs will be 1,1,1mm, independently of the input resolution ;-) Kind regards, /Eugeno
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Juan Eugenio Iglesias
From: Ajay Sharma ashar126@jh.edu Date: Sunday, October 19, 2025 at 5:47 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Re: SuperSynth installation
External Email - Use Caution Hi dear fellows,
What are the correct commands to follow to compare volume at 3 T and low field data.
High field is at 1,1,2 mm and lf at 2,2,5. We will convert lf inputs to 1,1,2 or 1,1,1.
What are correct command to run and perform analysis.
Many thanks
Get Outlook for Androidhttps://secure-web.cisco.com/1ITZUaQpK_wNT0bfiWzDfjVovtmX1A4Ul4Xn-6nvjXNFR6mYAppDThfKiAdQtcvpFMBd44daZ-fYHWThnamxuZNwliIsPlk2ia2BKcZcrvzk8vjPDTqcrCT2JVcq2Ia7ey-QdfSLBxJfREEPSfmnH7mX97gEKxH4UCugrNMmmTdYMsQruO-dd8OWokKtq9Cuf73jX_9VNfdpQ4v8dc1-ejGlyK43vzE-k00j0L8HNq8Yuz-hM7S7Ql0WE3PuNI1ST6VpGi_ZF-qlhT8ZpOzjJhpwJPJ--txch0GHhVfzaI-iKvy8N0miskev4eP-vRJNx/https%3A%2F%2Faka.ms%2FAAb9ysg ________________________________ From: Iglesias Gonzalez, Juan E. JIGLESIASGONZALEZ@mgh.harvard.edu Sent: Thursday, October 16, 2025 5:10:23 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Re: SuperSynth installation
External Email - Use Caution
[like] Iglesias Gonzalez, Juan E. reacted to your message: ________________________________ From: Villagran Asiares, Alberto Gaston Alberto.Villagran@med.uni-muenchen.de Sent: Thursday, October 16, 2025 8:15:07 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Re: SuperSynth installation
External Email - Use Caution
Dear Eugenio,
Thanks for the info. I see I will have to update my ubuntu hah
Best,
Alberto
Alberto Villagran, MSc.
Medical imaging scientist, cBrain
LMU University Hospital
cBRAIN | Child Brain Research and Imaging in Neuroscience
Department of Child and Adolescent Psychiatry, Psychosomatics, and Psychotherapy
Campus Innenstadt | Nussbaumstr. 5 | 80336 Munich, Germany
alberto.villagran@med.uni-muenchen.de | www.lmu-klinikum.dehttp://secure-web.cisco.com/1MyCOIBw7riMdMPvSiARXbI7p5kd3iQeYvOQjm6X5LbePVeMPPnJmfLZ_yU38L0EFEkQw4WNa8x8UQMPEoKAafSb7bEZjS0yI6LgkDS20So348FETHk0KBCX0HyXjGKiT3yZn9RPRIBXgMcT4A-W1BC3ATlauGoyHcH_hUeaPI7vX9ZWLMif3qofWmCZKdteoqlVnyvvCCOjc5JeZpUDlgEMTiORCHlmzD-6t4tKVO-L-ehzoRjVGznh6ZZmY5aajVoNTgzRFut2LoDf8dH8pRNUoBZkkHfJRijzxh2cfT8InS6FJKqOvTMkKHfdrS4BGxf1tPi3WvNT8CN7WZ2erow/http%3A%2F%2Fwww.lmu-klinikum.de%2F | www.pediatric-neuroimaging.dehttp://secure-web.cisco.com/1aK26hKT4rdr1BqwBSfNtowzfTHBIK0ObozDnQPkxCeEhM9d_XmMI2vaKj1XeD5YrDNK8IeaYE1enPgyK2fabaf1FhLVJW7TFEgsNhdVijGxBDT7qX_YSnV8K-Oy4efcLzqiRk8BwXOhnkJU1x7P0MJa8ainYz27LOnaJZ24ISGROpTmfLJvKnrgm5tZln99hi8vcJ9TTnBIA-lM8if0OvUgC4n_Cy7Sl2gCXNEp9FMPd1YcmJT8okq1dMRPGHGKcDgT0TroIjCVHIALrrzCwPGZUpn0bZDed1fr29TWOvPvHdJ8_7xeQdltc8RXhSL8JD8gT2VSkTaeoCg3qogi2qg/http%3A%2F%2Fwww.pediatric-neuroimaging.de%2F
[1689928693747]
The LMU University Hospital Munich is an institution under Public Law
________________________________ From: Iglesias Gonzalez, Juan E. JIGLESIASGONZALEZ@mgh.harvard.edu Sent: Friday, 10 October 2025 16:27:21 To: Freesurfer support list Subject: [Freesurfer] Re: SuperSynth installation
Dear Alberto, Download and install the development version of FreeSurfer: https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev/https://secure-web.cisco.com/1XNKWMoZEq-WswQI2sfoMTLPnpIRCh0Dnal7ofyynfx2iANUtsw6Sa68xdvGCqxprxDOErCNF7V782vtJsKSs4_YC0hcEtjTt9rI9QgFJbmdJDJFVXQSocKo_jc15NTRDQYnVc-1IAxQoM1b5olMLdnIBTtZ4cBnoWNc-3u6c1Gtoms4lCSu278ouJAJm3b67fKamLyQDMV_r9dRGOITKIZPvDLuO2YcqI6m6XGDB_3lHbEWW1ESyU5LlDi3CmdZ2MW2eiwqC30WxU4fYai8eW1uiwR1y34tIocC1xc2BXPwveu3O9BgflqN45BhAkGTSx96xShhDDZz1ZxqUu-gPuw/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Fpub%2Fdist%2Ffreesurfer%2Fdev%2F SuperSynth will be in there. Cheers, /Eugenio
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Juan Eugenio Iglesias
From: Villagran Asiares, Alberto Gaston Alberto.Villagran@med.uni-muenchen.de Date: Friday, October 10, 2025 at 3:57 AM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] SuperSynth installation
External Email - Use Caution
Dear FS team,
I would like to download and install the new tool SuperSynth, but in the website https://surfer.nmr.mgh.harvard.edu/fswiki/SuperSynthhttps://secure-web.cisco.com/18MP8JHWryfxiACBRnfoU4br-5flNCh2swH8o1jClq0ot-VRaFMF1Yt9qJtlqXnATtmGrnSYbmd7armoVBtzYaQSBXfARg8ibND4uX0U6E_zbtrmS6GojF1JLfhQx21U3Y5P2owz_cmimbiX3RlW5nQGZlvQNt6L1QJiVcPbm9oCzhOHwhp9mQEQwo63JjjfJDFUFfPBdtC7Bi1-oqSl1EjLWEfuvuTmMw8DaV2mW1Qz_BcCLArx7dhqN6hl3iBH3E-C5-4cXy_9YmEhhhcsEk24wDVhNgN3VKF8xuHwW1b0Cq7YeT_C-A-9LlrQzoXC3Eieo3TbmW1Njc8GveWYzHg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FSuperSynth it is not clear to me how to get it.
Thanks in advance,
Best,
Alberto
Alberto Villagran, MSc.
Medical imaging scientist, cBrain
LMU University Hospital
cBRAIN | Child Brain Research and Imaging in Neuroscience
Department of Child and Adolescent Psychiatry, Psychosomatics, and Psychotherapy
Campus Innenstadt | Nussbaumstr. 5 | 80336 Munich, Germany
alberto.villagran@med.uni-muenchen.de | www.lmu-klinikum.dehttp://secure-web.cisco.com/1rcKy1exbD7l9jcnkpm5mFD6w6-_OSaM6e10o153_MNCN_HiTMak-y57OE2WfLZEkzNGKBqbOiGUXfaCigJiAAkcuvXcb7eoC01RUOtUiFSxURqOcsAb6E3WYzJT8x4WLEfnrM5uVSTAZEpaKTYIXj71IhQqEJNozvVVq0jYuKf9cTdR0TBeR7oQJrd2B3SRRrrnWHH_P_Yxn4cSF64MVGhxpBtP2mJ6n6iVBcEVUosnQXOIvihjkMFx6JpegAUEaFhb6F8_Wcndg74-eVXttwzyofUKItScKiWKDlQEqx8kYc44xxcu3kMB9kbQOjCvF8Fuaz7iFWMHVNcirr8GX5w/http%3A%2F%2Fwww.lmu-klinikum.de%2F | www.pediatric-neuroimaging.dehttp://secure-web.cisco.com/1Cm49ihGGXeuPrHL8EwNOUG8a1I_sg8_l56Poy_-xnm2Up_nsNmkCydbKrNwtYoqoW7eFgt7oZ9BQaVmc1lRpPbf56K_jn8ML2CN098wbVhrbxe-2NPlPS86uMCEHy4Kms2nMhiXz9VZZKx--FObKaQEAdkx8TKd1LAobogJIH-Otnqcz3XFUth-uxl8v38-3DqCTm5vWVSObeS2xBs3OyLc5aJcZJIliAkJhPiHZq7ojUi-US8sgUJyyuLD5sBlghzuHC9sa_EjdomMXEtbOhNC7jH1imH8hfY9xRto540xA9iuUXCJsxp2Y2m0K-AXsCdCB_J1acx39cKQuAHRTNw/http%3A%2F%2Fwww.pediatric-neuroimaging.de%2F
[1689928693747]
The LMU University Hospital Munich is an institution under Public Law
