it shouldn't be, but it seems like it was complaining that the input wasn't "conformed". Can you run mri_info on the volume after you edited it?
On Fri, 6 Jan 2017, Lucette Cysique wrote:
Dear Bruce Many thanks We are doing the aseg edits in Freeview. Is that an issue? I will use the command line you sent Many thanks Lucette
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of freesurfer-request@nmr.mgh.harvard.edu freesurfer-request@nmr.mgh.harvard.edu Sent: Friday, January 6, 2017 4:00:04 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Freesurfer Digest, Vol 155, Issue 8 Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu
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Today's Topics:
1. V6 beta freeview - stopped loading remaining files when one is missing (Antonin Skoch) 2. freeview V6beta - reposition surface option (Antonin Skoch) 3. Re: mri_convert error message (Bruce Fischl) 4. Re: V6 beta freeview - stopped loading remaining files when one is missing (Ruopeng Wang) 5. Re: 6.0.0 release (Tobias Granberg) 6. Problem with freeview (Jennifer Szeto) 7. Re: minor edits to aseg lead to exist with errors in about 25% of my scans (Lucette Cysique) 8. Re: minor edits to aseg lead to exist with errors in about 25% of my scans (Bruce Fischl) 9. Re: Problem with freeview (Ruopeng Wang) 10. Re: Problem with freeview (Jennifer Szeto) 11. Postdoctoral Fellow in Machine Learning in Neuroimaging (Thomas Yeo) 12. Postdoctoral fellow in mental disorder subtypes (Thomas Yeo) 13. Fwd: REMINDER: OHBM 2017 Call For Council Nominations (Douglas N Greve)
Message: 1 Date: Wed, 4 Jan 2017 21:38:53 +0100 From: Antonin Skoch ansk@ikem.cz Subject: [Freesurfer] V6 beta freeview - stopped loading remaining files when one is missing To: freesurfer@nmr.mgh.harvard.edu Message-ID: 1798454155-32478@posta.medicon.cz Content-Type: text/plain; charset="utf-8"
Dear experts,
with V6 beta version of freeview I encountered, that when some input file specified in command line is missing, the loading of remaining files is stopped. This was not the case with 5.3 version. I found this feature handy. Do you think that it would be good to implement this behavior also for V6 version of freeview?
Regards,
Antonin Skoch