And what labels does this mri_annotation2label give? Does it give the outer cortical boundary as well? On Tue, Aug 22, 2017 at 12:19 AM Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
when you run mri_annotation2label you can specify the surface (--surface). By default, it uses white, but you can specify pial instead
On 08/21/2017 11:33 AM, Fereshte wrote:
Hello FreeSurfer developers, Is it possible to have the segmentation labels after the pial surface is done in FreeSurfer? I mean once you do the topology correction and expand the inner cortical boundary to make the pial surface ; is it possible to have the inner and outer cortical boundaries as labels from pial surface? Looking forward to hearing from you Sincerely, Fereshte Ramezani
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