Thank you for your answer. I'm not sure I understand your question right, but I just processed the file using following procedures. 1. recon-all -autorecon1 -nuintensitycor-3T (because mine was 3T) 2. skullstripping brain mask using gcuts 3. adding control points (only on the left hemisphere) 4. recon-all -autorecon2-cp and this figure was made by a commnad line, [tkmedit wm.mgz -aux brain.mgz -surfs]. Best, EK.
2012/10/10 Bruce Fischl fischl@nmr.mgh.harvard.edu
what was the name of the file that you transferred?
On Wed, 10 Oct 2012, EK Kim wrote:
I already uploaded this problem 2 days ago, reprocessing the subject to
make sure about control points. However when I added the control points to the left hemisphere, the right hemisphere surface was changed severely. I used the command line, recon-all -autorecon2-cp -s subjectID. Could you tell me why does it occur and how to deal with it?
Best,
EK
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