Hi Alan,
You probably don't have the matlab image processing toolbox installed.
Let me know if you can't install it easily.
Best,
Marie
On Jul 9, 2014, at 11:51 AM, Alan Francis <alandarkenergy@gmail.commailto:alandarkenergy@gmail.com> wrote:
Hi Marie & FreeSurfers:
I am running the LGI command on a group of brains and I am getting an error message. MATLAB opens up and begins to run when this error appears:
< M A T L A B (R) > Copyright 1984-2011 The MathWorks, Inc. R2011b (7.13.0.564) 64-bit (maci64) August 13, 2011
To get started, type one of these: helpwin, helpdesk, or demo. For product information, visit www.mathworks.comhttp://www.mathworks.com/.
reading filled volume...
closing volume... {Undefined function 'fspecial' for input arguments of type 'char'.
Error in make_outer_surface (line 31) Gaussian = fspecial('gaussian',[2 2],1); }
I tried setting the environment using :
setenv MATLABPATH /Applications/MATLAB_2011/bin setenv PATH ${MATLABPATH}/bin:${PATH}
However this did not help. Any advice?
thanks,
Alan