Re: [Freesurfer] mri_average vs mri_concat

7 Nov 2016

      Hi Doug
I am confused. The values of the input .mnc for mri_vol2surf are 0 and 1.*
I attach a snapshot using an inhouse software where you can see the "1"
highlighted in blue.* We also used the following command to ensure they are
0 and 1:
minclookup ' label_folder '/labels_final_minc1.mnc ' label_folder
'/label_aalf.mnc -discrete -lut_string "4 1" -clobber --> this extracts my
id 4 that I painted this sulcus with and gives it a value of 1.
Do you mean you do not see the binary values on your end?
Trisanna
--
Ph.D. Candidate
McGill University
Integrated Program in Neuroscience
Psychology
On Mon, Nov 7, 2016 at 3:53 PM, Douglas N Greve greve@nmr.mgh.harvard.edu
wrote:
...
It looks like the input has values of 255 and 0, not 1 and 0. How do you
verify that the values are 0 and 1?
On 11/07/2016 03:43 PM, Trisanna Sprung-Much wrote:
...
Hi Doug
I have uploaded the label_aalf.mnc and testsurfaceoverlay.mgz
Here is an example of the mri_vol2surf that I use

trisanna@kaplan:~$ mri_vol2surf --mov
/data-01/trisanna/freesurfer/icbm-113/label/label_aalf.mnc --o
/data-01/trisanna/freesurfer/icbm-113/testsurfaceoverlay.mgz --hemi lh
*--surf pial --regheader icbm-113
srcvol = /data-01/trisanna/freesurfer/icbm-113/label/label_aalf.mnc
srcreg unspecified
srcregold = 0
srcwarp unspecified
surf = pial
hemi = lh
reshape = 0
interp = nearest
float2int = round
GetProjMax = 0
INFO: float2int code = 0
INFO: changing type to float
Done loading volume
Computing registration from header.
  Using /data-01/trisanna/freesurfer/icbm-113/mri/orig.mgz as target
reference.
Reading surface /data-01/trisanna/freesurfer/icbm-113/surf/lh.pial
Done reading source surface
Mapping Source Volume onto Source Subject Surface
 1 0 0 0
using old
Done mapping volume to surface
Number of source voxels hit = 53960
Writing to /data-01/trisanna/freesurfer/icbm-113/testsurfaceoverlay.mgz
Dim: 159741 1 1

When I open this in Freeview, the values are either 0 or 255. However,
they were binary (0 or 1) in the label_aalf.mnc input file.*
The mri_concat command that I ran on label_aalf for 20 hemispheres is:
*trisanna@kaplan:~$ mri_concat
/data-01/trisanna/freesurfer/fsaverage/committee_meeting/DIS
PLAY_overlays_fsaverage_left/aalf_lh/*.mgz
...
--o
/data-01/trisanna/freesurfer/fsaverage/committee_meeting/DIS
PLAY_overlays_fsaverage_left/aalf_lh/mri_concat_test.mgz
...
--mean*
ninputs = 20
Checking inputs
nframestot = 20
Allocing output
Done allocing
nframes = 20
Computing mean across frames
Writing to
/data-01/trisanna/freesurfer/fsaverage/committee_meeting/DIS
PLAY_overlays_fsaverage_left/aalf_lh/mri_concat_test.mgz
...
thanks
Trisanna
--
Ph.D. Candidate
McGill University
Integrated Program in Neuroscience
Psychology
On Tue, Nov 1, 2016 at 2:45 PM, Douglas N Greve
<greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:
Can you send me the mri_concat command and also upload the input

files
...
to our filedrop?

https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>

On 11/01/2016 02:31 PM, Trisanna Sprung-Much wrote:
> Does anyone know who wrote the script for mri_concat? I would

really
...
> like to get this figured out.
>
> thanks
>
> Trisanna
>
> --
> Ph.D. Candidate
> McGill University
> Integrated Program in Neuroscience
> Psychology
>
>
> On Fri, Oct 21, 2016 at 12:13 PM, Trisanna Sprung-Much
> <trisanna.sprung-much@mail.mcgill.ca
<mailto:trisanna.sprung-much@mail.mcgill.ca>
> <mailto:trisanna.sprung-much@mail.mcgill.ca
<mailto:trisanna.sprung-much@mail.mcgill.ca>>> wrote:
>
>     thanks Bruce - I had indeed used this months ago but at the
>     workshop this semester Doug had suggested mri_concat as it is a
>     newer command and also doesn't blur the data. I am just having
>     problems creating percentage values with mri_concat.
>
>     *Would you know why mri_vol2surf is taking a binary minc
file and
>     creating values ranging from 0-255 that mri_concat then
preserves?*
>
>     best
>     Trisanna
>
>     --
>     Ph.D. Candidate
>     McGill University
>     Integrated Program in Neuroscience
>     Psychology
>
>
>     On Fri, Oct 21, 2016 at 9:29 AM, Bruce Fischl
>     <fischl@nmr.mgh.harvard.edu
<mailto:fischl@nmr.mgh.harvard.edu>
<mailto:fischl@nmr.mgh.harvard.edu
<mailto:fischl@nmr.mgh.harvard.edu>>>
>     wrote:
>
>         Hi Trisanna
>
>         not sure about mri_concat, but mri_average -noconform -p

...
...
>         should do the trick
>
>         cheers
>         Bruce
>         On Wed, 19 Oct 2016, Trisanna Sprung-Much wrote:
>
>             Something weird is happening with mri_vol2surf - even
>             though the data looks great, the values are odd
>             which carries over when I try to average with
mri_concat.
>             I would just like to get percentage values
>             with mri_concat.
>             thanks!
>
>             Trisanna
>
>             --
>             Ph.D. CandidateMcGill University
>
>             Integrated Program in Neuroscience
>             Psychology
>
>
>             On Mon, Oct 17, 2016 at 5:21 PM, Trisanna Sprung-Much
>             <trisanna.sprung-much@mail.mcgill.ca
<mailto:trisanna.sprung-much@mail.mcgill.ca>
>  <mailto:trisanna.sprung-much@mail.mcgill.ca
<mailto:trisanna.sprung-much@mail.mcgill.ca>>> wrote:
>                   Hi Doug
>
>             Here is what I ran:
>
>             trisanna@kaplan:~$ mri_vol2surf --mov
>
 /data-01/trisanna/freesurfer/icbm-113/label/label_aalf.mnc
>             --o
>
 /data-01/trisanna/freesurfer/icbm-113/testsurfaceoverlay.mg
<http://testsurfaceoverlay.mg>z
>             --hemi lh --surf pial --regheader
>             icbm-113
>             srcvol =
>
 /data-01/trisanna/freesurfer/icbm-113/label/label_aalf.mnc
>             srcreg unspecified
>             srcregold = 0
>             srcwarp unspecified
>             surf = pial
>             hemi = lh
>             reshape = 0
>             interp = nearest
>             float2int = round
>             GetProjMax = 0
>             INFO: float2int code = 0
>             INFO: changing type to float
>             Done loading volume
>             Computing registration from header.
>               Using
/data-01/trisanna/freesurfer/icbm-113/mri/orig.mgz
>             as target reference.
>             Reading surface
>             /data-01/trisanna/freesurfer/icbm-113/surf/lh.pial
>             Done reading source surface
>             Mapping Source Volume onto Source Subject Surface
>              1 0 0 0
>             using old
>             Done mapping volume to surface
>             Number of source voxels hit = 53960
>             Writing to
>
 /data-01/trisanna/freesurfer/icbm-113/testsurfaceoverlay.mg
<http://testsurfaceoverlay.mg>z
>             Dim: 159741 1 1
>
>             When I open this in Freeview, the values are either 0

or
...
>             255 (see attached image). However, they
>             were binary (0 or 1) in the label_aalf.mnc input

file...
...
>
>             Trisanna
>
>
>             --
>             Ph.D. CandidateMcGill University
>
>             Integrated Program in Neuroscience
>             Psychology
>
>
>             On Wed, Oct 12, 2016 at 2:09 PM, Douglas N Greve
>             <greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu <mailto:

greve@nmr.mgh.harvard.edu>>> wrote:
...
>                   Hmmm, I don't know what could be going on. Can

you
...
>             send the command line
>                   and all terminal output?
>
>
>                   On 10/06/2016 10:37 PM, Trisanna Sprung-Much
wrote:
>                   > Hi Doug
>                   >
>                   > So the pixel values are 0 and 1 *in the

original
...
>             .mnc*. It seems that
>                   > after performing mri_vol2surf they become 0 and
>             255, and stay this way
>                   > after mri_surf2surf as well. So, why would
>             mri_vol2surf be changing
>                   > the values?
>                   >
>                   > Trisanna
>                   >
>                   >
>                   >
>                   > --
>                   > Ph.D. Candidate
>                   > McGill University
>                   > Integrated Program in Neuroscience
>                   > Psychology
>                   >
>                   >
>                   > On Thu, Oct 6, 2016 at 11:30 AM, Douglas Greve
>                   > <greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>             <mailto:greve@nmr.mgh.harvard.edu <mailto:

greve@nmr.mgh.harvard.edu>
...
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>> wrote:
>                   >
>                   >     What are the pixel values in the mgz file?
>             They should be binary,
>                   >     ie, 1=in a label, 0 = out of label
>                   >
>                   >
>                   >     On 10/6/16 10:22 AM, Trisanna
Sprung-Much wrote:
>                   >>     Overlays in .mgz format using mri_vol2surf
>                   >>
>                   >>     --
>                   >>     Ph.D. Candidate
>                   >>     McGill University
>                   >>     Integrated Program in Neuroscience
>                   >>     Psychology
>                   >>
>                   >>
>                   >>     On Wed, Oct 5, 2016 at 5:56 PM, Douglas
N Greve
>                   >>     <greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>  <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>> wrote:
>                   >>
>                   >>         what is a labeled vertex? What file
>             format? mgz? annot?
>                   >>
>                   >>
>                   >>         On 10/05/2016 05:03 PM, Trisanna
>             Sprung-Much wrote:
>                   >>         > the source files are labelled
vertices
>             from 20 subjects:
>                   >>         >
>                   >>         > -T1s were labelled using an MNI
software
>                   >>         > -Surfaces were created in FreeSurfer
>             and surface overlays
>                   >>         of the
>                   >>         > labels were created using
mri_vol2surf
>                   >>         > -Surface overlays were registered to
>             fsaverage using
>                   >>         mri_surf2surf and
>                   >>         > then averaged to create a

probability
...
>             map, originally using
>                   >>         "mri_average"
>                   >>         >
>                   >>         > So, essentially the overlays are
binary
>             files of my labels
>                   >>         I believe
>                   >>         > - I can send one over if you wish.
>                   >>         >
>                   >>         > Trisanna
>                   >>         >
>                   >>         >
>                   >>         > --
>                   >>         > Ph.D. Candidate
>                   >>         > McGill University
>                   >>         > Integrated Program in Neuroscience
>                   >>         > Psychology
>                   >>         >
>                   >>         >
>                   >>         > On Wed, Oct 5, 2016 at 4:52 PM,
Douglas
>             N Greve
>                   >>         > <greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>      >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>> wrote:
>                   >>         >
>                   >>         >     what are the source files ("all
>             files"). What data
>                   >>         type, value range,
>                   >>         >     where did they come from?
>                   >>         >
>                   >>         >
>                   >>         >     On 10/05/2016 04:48 PM, Trisanna
>             Sprung-Much wrote:
>                   >>         >     > Hi Doug
>                   >>         >     >
>                   >>         >     > So, of course now it works
>             without --keep-filetype...
>                   >>         :p it looks
>                   >>         >     > pretty much the same was when

I
...
>             use --keep-filetype.
>                   >>         >     >
>                   >>         >     > However, the values of Min and
>             Max are still odd (out
>                   >>         of 256) - see
>                   >>         >     > snapshot
>                   >>         >     >
>                   >>         >     > Trisanna
>                   >>         >     >
>                   >>         >     >
>                   >>         >     >
>                   >>         >     >
>                   >>         >     >
>                   >>         >     > --
>                   >>         >     > Ph.D. Candidate
>                   >>         >     > McGill University
>                   >>         >     > Integrated Program in
Neuroscience
>                   >>         >     > Psychology
>                   >>         >     >
>                   >>         >     >
>                   >>         >     > On Wed, Oct 5, 2016 at 4:23

PM,
...
>             Douglas N Greve
>                   >>         >     > <greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>
>                   >>         >
 <mailto:greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu

>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>                   >>         > <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>>> wrote:
>                   >>         >     >
>                   >>         >     > Depending upon the type of the
>             data, the
>                   >>  --keep-datatype may
>                   >>         >     mess
>                   >>         >     > things
>                   >>         >     >    up quite a bit. What

happens
...
>             if you don't include
>                   >>         that? It
>                   >>         >     will not
>                   >>         >     > create an annotation. maybe

you
...
>             mean some other
>                   >>         file type?
>                   >>         >     >
>                   >>         >     >
>                   >>         >     >    On 10/05/2016 02:36 PM,
>             Trisanna Sprung-Much wrote:
>                   >>         >     > >
>                   >>         >     > > Hi Doug
>                   >>         >     > >
>                   >>         >     > > I spoke with you at the
>             Freesurfer tutorial
>                   >>         last week
>                   >>         >     about using
>                   >>         >     > > mri_average to average my
>             sulcal labels and get a
>                   >>         >  probability map on
>                   >>         >     > > fsaverage. You had suggested
>             using "mri_concat"
>                   >>         instead,
>                   >>         >     which is a
>                   >>         >     > > newer command. So, I
performed
>             the following
>                   >>         command:
>                   >>         >     > >
>                   >>         >     > > *mri_concat all files --o
>             output.mgz --mean
>                   >>  --keep-datatype*
>                   >>         >     > >
>                   >>         >     > > I had to put --keep-datatype
>             or else it tried
>                   >>         to create an
>                   >>         >     annot
>                   >>         >     > file.
>                   >>         >     > >
>                   >>         >     > > This worked just fine.
>                   >>         >     > >
>                   >>         >     > > My question then is
concerning
>             *the min and max
>                   >>         values
>                   >>         >     *when this
>                   >>         >     > > average is overlayed in
>             Freeview. See the snapshot
>                   >>         >  attached. The
>                   >>         >     > > values seem to be based
on 256
>             instead of
>                   >>         percentage and
>                   >>         >     this is
>                   >>         >     > what
>                   >>         >     > > happens when I used
>             "mri_average" without
>                   >>         specifying the
>                   >>         >     "-p". Is
>                   >>         >     > > there a way to illustrate

the
...
>             values in
>                   >>         percentage in a
>                   >>         >  similar way
>                   >>         >     > > with mri_concat?
>                   >>         >     > >
>                   >>         >     > > Many thanks!
>                   >>         >     > >
>                   >>         >     > > Trisanna
>                   >>         >     > >
>                   >>         >     > >
>                   >>         >     > > --
>                   >>         >     > > Ph.D. Candidate
>                   >>         >     > > McGill University
>                   >>         >     > > Integrated Program in
Neuroscience
>                   >>         >     > > Psychology
>                   >>         >     > >
>                   >>         >     > >
>                   >>         >     > >
>                   >>         >     > >
>             _______________________________________________
>                   >>         >     > > Freesurfer mailing list
>                   >>         >     > >
Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.har

vard.edu>
...
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>                   >>
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>                   >>         >
>              <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>                   >>
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>
>                   >>         >     >
>              <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>                   >>
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>                   >>         >
>              <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>                   >>
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>>
>                   >>         >     > >
>                   >>         >
>                   >>
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>                   >>
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>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>>>
>                   >>         >     >
>                   >>         >     >    --
>                   >>         >     > Douglas N. Greve, Ph.D.
>                   >>         >     > MGH-NMR Center
>                   >>         >     > greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>
>                   >>         >
 <mailto:greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu

>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>                   >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>>
>                   >>         >     > Phone Number:617-724-2358
<tel:617-724-2358>
>             <tel:617-724-2358 <tel:617-724-2358>>
<tel:617-724-2358 <tel:617-724-2358> <tel:617-724-2358
<tel:617-724-2358>>>
>             <tel:617-724-2358 <tel:617-724-2358>
<tel:617-724-2358 <tel:617-724-2358>>
>                   >>         <tel:617-724-2358
<tel:617-724-2358> <tel:617-724-2358 <tel:617-724-2358>>>>
>                   >>         >  <tel:617-724-2358 <tel:

617-724-2358>
...
>             <tel:617-724-2358 <tel:617-724-2358>>
<tel:617-724-2358 <tel:617-724-2358> <tel:617-724-2358
<tel:617-724-2358>>>
>             <tel:617-724-2358 <tel:617-724-2358>
<tel:617-724-2358 <tel:617-724-2358>>
>                   >>         <tel:617-724-2358
<tel:617-724-2358> <tel:617-724-2358 <tel:617-724-2358>>>>>
>                   >>         > >  Fax: 617-726-7422

tel:617-726-7422
...
>             <tel:617-726-7422 <tel:617-726-7422>>
<tel:617-726-7422 <tel:617-726-7422> <tel:617-726-7422
<tel:617-726-7422>>>
>             >>         <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422 <tel:617-726-7422>>
>             <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422 <tel:617-726-7422>>>> <tel:617-726-7422
>  <tel:617-726-7422 <tel:617-726-7422>>
>             >>         <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422>>
>             >>         >     <tel:617-726-7422
<tel:617-726-7422> <tel:617-726-7422>
>             <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422>>>>
>             >>         >     >
>             >>         >     >  Bugs:
>             >> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>
>             >>         >
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>>
>             >>         >     >
>             >>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>
>             >>         >
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>>>
>             >>         >     >  FileDrop:
>             >> https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>
>             >>         >
>              <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>>
>             >>         >     >
>              <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>
>             >>         >
>              <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>>>
>             >>         >     >
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>
>             >>         >
>             >>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>>
>             >>         >     >
>             >>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>
>             >>         >
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>>>
>             >>         >     >  Outgoing:
>             >>         >     >
>             >>
> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>
>             >>         >
>             >>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>>
>             >>         >     >
>             >>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>
>             >>         >
>             >>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>>>
>             >>         >     >
>             >>         >     >
>             _______________________________________________
>             >>         >     > Freesurfer mailing list
>             >>         >     > Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>         >
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>
>             >>       >     <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>         > <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>>
>             >>         >     >
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>         >
>             >>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>>
>             >>         >     >
>             >>         >
>             >>
> <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>         >
>             >>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>>>
>             >>         >     >
>             >>         >     >
>             >>         >     >  The information in this e-mail is
>             intended only
>             >>         for the
>             >>         >     person to
>             >>         >     >  whom it is
>             >>         >     > addressed. If you believe this

e-mail
...
>             was sent to
>             >>         you in
>             >>         >     error and
>             >>         >     >  the e-mail
>             >>         >     >  contains patient information,
>             please contact the
>             >>         Partners
>             >>         >     > Compliance HelpLine at
>             >>         >     >
http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>
>             >>         <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>>
>             >>         >
 <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>
>             >>         <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>>>
>             >>         >     >
>              <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>
>             >>         <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>>
>             >>         >
 <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>
>             >>         <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>>>> . If the e-mail
>             >>         was sent
>             >>         >     >     to you in error
>             >>         >     >  but does not contain patient
>             information, please
>             >>         contact the
>             >>         >     >  sender and properly
>             >>         >     >  dispose of the e-mail.
>             >>         >     >
>             >>         >     >
>             >>         >     >
>             >>         >     >
>             >>         >     >
>             _______________________________________________
>             >>         >     > Freesurfer mailing list
>             >>         >     > Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>         >
 <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>
>             >>         >     >
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>         >
>             >>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>>
>             >>         >
>             >>         >     --
>             >>         >     Douglas N. Greve, Ph.D.
>             >>         >     MGH-NMR Center
>             >>         > greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>             >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>             >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>             >>         <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>>
>             >>         >     Phone Number: 617-724-2358
<tel:617-724-2358>
>             <tel:617-724-2358 <tel:617-724-2358>>
<tel:617-724-2358 <tel:617-724-2358>>
>             >>         <tel:617-724-2358 <tel:617-724-2358>
<tel:617-724-2358>
>             <tel:617-724-2358 <tel:617-724-2358>
<tel:617-724-2358>>>
>             >>         >     Fax: 617-726-7422
<tel:617-726-7422> <tel:617-726-7422>
>             <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422>> <tel:617-726-7422
>             <tel:617-726-7422 <tel:617-726-7422>>
>             >>         <tel:617-726-7422 <tel:617-726-7422>
<tel:617-726-7422>>>
>             >>         >
>             >>         >     Bugs:
> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>
>             >>         >
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>>
>             >>         >     FileDrop:
> https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>
>             >>         >
>              <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>>
>             >>         >
> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>
>             >>         >
>             >>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>>
>             >>         >     Outgoing:
>             >>         >
>             >>
> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>
>             >>         >
>             >>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>>
>             >>         >
>             >>         >
_______________________________________________
>             >>         >     Freesurfer mailing list
>             >>         > Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>>
>             >>         >
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>         >
>             >>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>>
>             >>         >
>             >>         >
>             >>         >
>             >>         >
>             >>         >
_______________________________________________
>             >>         > Freesurfer mailing list
>             >>         > Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>         >
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>
>             >>         --
>             >>         Douglas N. Greve, Ph.D.
>             >>         MGH-NMR Center
>             >> greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>
>             <mailto:greve@nmr.mgh.harvard.edu
<mailto:greve@nmr.mgh.harvard.edu>>>
>             >>         Phone Number: 617-724-2358
<tel:617-724-2358> <tel:617-724-2358>
>             <tel:617-724-2358 <tel:617-724-2358>

tel:617-724-2358>
...
>             >>         Fax: 617-726-7422 <tel:617-726-7422>
<tel:617-726-7422>
>             <tel:617-726-7422 <tel:617-726-7422>

tel:617-726-7422>
...
>             >>
>             >>         Bugs:
> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             >>
>
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>>
>             >>         FileDrop:
> https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>
>             >>
 <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>>>
>             >>
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             >>
>
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>>
>             >>         Outgoing:
>             >>
> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
>             >>
>
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>>
>             >>
>             >> _______________________________________________
>             >>         Freesurfer mailing list
>             >> Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>         <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >>
>             >>
>             >>
>             >>
>             >>  _______________________________________________
>             >>     Freesurfer mailing list
>             >> Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >>     <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >>
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >>
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             >  _______________________________________________
>             Freesurfer mailing
>             >     list Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             > <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>>
>             >
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             >
>
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>>
>             The
>             >     information in this e-mail is intended only
for the
>             person to whom
>             >     it is addressed. If you believe this e-mail
was sent
>             to you in
>             >     error and the e-mail contains patient

information,
...
>             please contact
>             >     the Partners Compliance HelpLine at
>             > http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>
>             >     <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>
>             <http://www.partners.org/complianceline
<http://www.partners.org/complianceline>>> . If the e-mail
>             was sent
>             >     to you in error but does not contain patient
>             information, please
>             >     contact the sender and properly dispose of the
e-mail.
>             >
>             > _______________________________________________
>             > Freesurfer mailing list
>             > Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>
>             <mailto:Freesurfer@nmr.mgh.harvard.edu
<mailto:Freesurfer@nmr.mgh.harvard.edu>>
>             >
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>
>
 <https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
<https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer>>
>             --
>             Douglas N. Greve, Ph.D.
>             MGH-NMR Center
> greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
<mailto:greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu

...
>             Phone Number: 617-724-2358 <tel:617-724-2358>
<tel:617-724-2358>
>             Fax: 617-726-7422 <tel:617-726-7422>

tel:617-726-7422
...
>
>             Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
>
 <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>>
>             FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
>             <https://gate.nmr.mgh.harvard.edu/filedrop2
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> www.nmr.mgh.harvard.edu/facility/filedrop/index.html
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>
 <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>>
>             Outgoing:
> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>
>
 <ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>>
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu>
Phone Number: 617-724-2358 <tel:617-724-2358>
Fax: 617-726-7422 <tel:617-726-7422>

Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
<http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting>
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
<https://gate.nmr.mgh.harvard.edu/filedrop2>
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
<http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html>
Outgoing:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
<ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/>

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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/

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Re: [Freesurfer] mri_average vs mri_concat