Re: [Freesurfer] Number of pixel count

yes, but recon-all will run it for you and store the results in text files in each subject's stats dir On Fri, 14 Feb 2014, Saurabh Thakur wrote:

Hi Bruce,

That means i should use mri_segstats for the same....?

Thanks,

cheers Saurabh Thakur,

On Wed, Feb 12, 2014 at 6:52 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote: Hi Saurabh

  we don't measure sulcal CSF as it's really not visible on only a
  T1. The other measures should all be in the files in the stats
  directory - no need to measure it yourself.

  cheers
  Bruce

  On Wed, 12 Feb 2014, Saurabh Thakur wrote:

        Hello Free surfer Expert ,
         
        I am kooking for the exact value of voxel / pixel
        which represent White
        ,Grey and CSF fluid matter in brain.

        I am trying to draw contour, and to measure the
        count...or How to count the
        pixel for particular region...?

        Thanks in advance for your timely advise.

        cheers
        Saurabh Thakur,

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