Yes it is taken at 3T. I have asked our team to provide these information about the MRIs and will let you know when I hear back. I also wanted to ask if you know a good way to refine the thalamus and fill out the missing parts within the volume?
Thank you Dorsa
On Tue, Jul 19, 2016 at 5:10 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
what is a "3TS" image? Do you mean it was acquired at 3T? What sequence and what parameters (TE/TR/TI/TD/flip angle)?
cheers Bruce On Tue, 19 Jul 2016, Dorsa Haji Ghaffari wrote:
Hi Bruce, that is a 3TS T1 weighted image and is taken after the patients have
taken
the contrast medium. I have played with the intensities in Analyze and
this
is the best I could get. Do you have any suggestions for getting better contrast?
Thank you
Dorsa
On Tue, Jul 19, 2016 at 4:29 PM, Bruce Fischl <
fischl@nmr.mgh.harvard.edu>
wrote: also, please post to the list so that others can answer! thanks Bruce On Tue, 19 Jul 2016, Dorsa Haji Ghaffari wrote:
Here it is. Also can you explain why the algorithm works best with 1mm^3 voxel size? Thank you!The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer