if their definition of what is and is not hippocampus differs from the one we use then you will get different volumes. You need to find out what they defined as part of it and see if it matches our protocol
cheers Bruce
On Tue, 2 Oct 2012, Ana Arruda wrote:
The manual protocol was made by doctors.They traced the hippocampus segmentation based on their knowledge of anatomical structures.
For automatic segmentation I've used the following command: recon-all -i input_suject_name -autorecon1 -autorecon2 -s output_subject_name
and after this simulation I've been working with the values given in the terminal X11 for left-hippocampus and right-hippocampus.
Am I doing anything wrong? Or am I missing something?