Hello K,
Can you try downloading the 6.0.0 release archive from the web site (please note it is 4.8G),
freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gzftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz
Then you will need 5 GB of space to uncompress it. I would add the v option so you can see the expansion in progress,
$ tar zxvpf freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz
- Rob
On Aug 11, 2018, at 2:55 AM, Schumman Resonance <schummanr@gmail.commailto:schummanr@gmail.com> wrote:
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Thanks for your response. I run the command you suggested and this is what I got: freesurfer/average/mult-comp-cor/fsaverage_sym/rh/cortex/fwhm04/pos/th33/mc-z.csd: (Empty error message) tar: Error exit delayed from previous errors.
Also, still no .sh files...
Best, K
On Fri, Aug 10, 2018 at 7:52 PM, Dicamillo, Robert <RDICAMILLO@mgh.harvard.edumailto:RDICAMILLO@mgh.harvard.edu> wrote: Hello Schumman,
Try the following command on the tar archive (cut and paste it if you like)
$ tar zxpf freesurfer-linux-centos6_x86_64-dev.tar.gz
and then take a look at the files.
- Rob
On Aug 10, 2018, at 10:25 PM, Schumman Resonance <schummanr@gmail.commailto:schummanr@gmail.com> wrote:
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Hi,
Couple of newbie questions. I downloaded the dev version of freesurfer and did: tar xvzf freesurfer-linux-centos6_x86_64-dev.tar.gz
to get
gzip: stdin: unexpected end of file tar: Unexpected EOF in archive tar: Unexpected EOF in archive tar: Error is not recoverable: exiting now
Also, when I ls the folder I couldn't see the SetUpFreesurfer.sh and SurferEnv.sh only the csh files.
Any pointers how to solve these would be appreciated.
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