External Email - Use Caution
If you do a case insensitive search for the string “error" in the log, you should see there are multiple listings of, IFLAG= -1 LINE SEARCH FAILED. SEE DOCUMENTATION OF ROUTINE MCSRCH ERROR RETURN OF LINE SEARCH: INFO= 4 POSSIBLE CAUSES: FUNCTION OR GRADIENT ARE INCORRECT OR INCORRECT TOLERANCES out of QuasiNewtonEMA: 008: -log(p) = -0..0 tol 0.000010 This thread indicates it could be the skull stripping is not right, and should be checked,https://secure-web.cisco.com/1diiACwYbRU5h086AYSNGiqllYdOKITn3ySdC0K_QfnQR43... R.
On Jan 6, 2024, at 01:10, yunus soleymani <soleymani.yunus@yahoo.com> wrote: External Email - Use Caution Hi Fargol,I recently heard about some problems from my coworkers who were using Ubuntu 18 and version 7.2.0 of the software. However, I am currently using version 7.2.0 on Ubuntu 22.04.2 LTS, and it works well for me. You could try it out and see if it works for you as well.bests,Yunus--------------------------------------------------------------------------------Yunus SoleymaniPh.D. Candidate of Neuroimaging Tehran University of Medical SciencesMailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be soleymani.yunus@yahoo.com+98 914 526 9298--------------------------------------------------------------------------------On Friday, January 5, 2024 at 10:05:54 PM GMT+3:30, Fargol Rezayaraghi <fargor@uw.edu> wrote: External Email - Use Caution Hi FreeSurfer Team,I hope this email finds you well. I'm trying to use a T1 image to get the aparc+aseg and wmparc nifti files. I was using this command: recon-all -s Subject1 -i T1.nii - all -notal -check ( I used recon-all -s Subject1 -i T1.nii - all first, and after getting Talairach error, I added -nota -check at the end).I'm getting the following messages without a clear error number: recon-all -s Subject1 exited with ERRORS at Thu Dec 14 21:18:02 EST 2023For more details, see the log file /home/developer/Desktop/freesurfer/7.2.0/subjects/Subject1/scripts/recon-all.logTo report a problem, see MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://secure-web.cisco.com/1n6sdsWRV3TG8Jv2QrC7lr2OJkNo-vKWiVDfRMiE5lmXlfr-... version of the freesurfer: freesurfer-linux-ubuntu18_x86_64-7.2.0-20210721-aa8f76bMy platform is ubuntu 18_04_06 on Oracle VM VirtualBoxI've attached the log file. -- Kind Regards,Fargol R. Araghi (Rezayaraghi)Ph.D. Candidate, University of WashingtonDepartment of Mechanical EngineeringMailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be http://secure-web.cisco.com/1MEbXNSnnv7NT1-4EzMYIfzctR98Iydj5J9JFwfH6Kv4xQ8R... mailing listFreesurfer@nmr.mgh.harvard.eduMailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to be https://secure-web.cisco.com/1WLCgxPTXYmh2RXigsOXigGsIv-l-w5--kmcWP7kJObpHK9... mailing listFreesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer