Dear Devika, The command is longHippoSubfieldsT1.sh. You can find the instructions here: https://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalHippocampalSubfields Cheers, /Eugenio
Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Devika K devikakuttala@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Saturday, April 4, 2020 at 13:31 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Hippocampal subfield volumes.
External Email - Use Caution Hi,
I want to extract hippocampal subfield volume from longitudinal samples. I ran recon-all-all with longitudinal pipeline for all those samples in FreeSurfer 6.0.
How I need to process further (Commands that I need to follow). Would you please help me out?
Regards Devika K