Hi Pratap See below for bugr info and I have attached the log file. I assumed you were asking for surfer.log. Let me know if it some other log file.
Thank you Cibu ---------------------------------------------------------------------
FREESURFER_HOME: /usr/local/freesurfer/stable4
Build stamp: freesurfer-Linux-centos4_x86_64-stable-v4.0.5-20080918
RedHat release: CentOS release 4.2 (Final)
Kernel info: Linux 2.6.9-22.0.2.106.unsupported x86_64
NMR Center info (/space/freesurfer exists):
machine: snapjudge
SUBJECTS_DIR: /space/barlab/5/users/mark/subjects_depMOCS_V4/
PWD: /autofs/space/barlab_002/users/cibu/dep_LGI
--------------------------------------------------------------------- Please include the following additional information in your report:
1) subject name 2) the entire command-line executed 3) the error message generated 4) optionally include the subject's /script/recon-all.log
See also: http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
On Thu, 2008-09-18 at 10:46 -0400, Pratap Kunwar wrote:
Hi Cibu,
can you provide more informations using bugr command? also log file?
Hello When I run the mri_preproc command I am getting the message ERROR: cannot find fsaverage in /space/barlab_002/users/cibu/dep_LGI But the fsaverage folder is in the path and subjects_dir is set correctly. So I am not sure what's wrong with the command Here's the command I am trying to run
mris_preproc --fsgd lgi_N32_Dep_Ctrl_Age_BDI.fsgd --target fsaverage -- hemi lh --meas lgi --out N32_lgi_dep_ctrl_Age_BDI_lh.mgh
Any help would be greatly appreciated
Thankyou Cibu Thomas
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