Dear experts, I've finished FSv5.3 longitudinal analysis and I'm now running FSv6.0(beta) for hippocampal subfield features extraction (always on Ubuntu 14.01 environment).
After several trial I realized that before pipeline ends I've got the following error:
/opt/FreeSurfer-6-Beta/bin//mri_mask -T 0.5 T1resampled.mgz hippoMaskResampledDilated.mgz T1resampled.mgz >/dev/null: Signal 127 Error using kvlGEMSMatlab /cluster/koen/eugenio/GEMS/itkMGHImageIO.cxx:216: itk::ERROR: MGHImageIO(0x7fe88bcda050): Can't find/open file: T1resampled.mgz
Error in kvlReadCroppedImage (line 11)
Error in segmentSubjectT1_autoEstimateAlveusML (line 588)
Could you help me? Best Daniele
PS: Even though one of the last row display " finished without error", no output is generated in the /mri/ folder.