from my research assistant -
On XXX the coordinates on the right side of the screen in tkmedit always start with a negative number.
So that part is correct.
Our problem is that the brain is not flipped - if freesurfer displays radiological and SPM8zero displays neurological, then when you compare the 2 side by side, the brains should be mirror images. Ours are not, they are the same.
Make sense?
On Tue, Sep 20, 2011 at 2:26 PM, Ilana Hairston hairstonster@gmail.comwrote:
could you check this? this a followup on my original email after looking at 110???yl with Barbara and Steve. thanks i.
On Tue, Sep 20, 2011 at 2:23 PM, Douglas N Greve < greve@nmr.mgh.harvard.edu> wrote:
What are the talairach coords for the left hemi? The first coordinate (x) should always be negative. doug
Ilana Hairston wrote:
Hi Doug, No, we had the lh loaded in tksurfer, and when saving a point it showed up on the _left_ in tkmedit (i.e., the right side). thanks ilana
On Tue, Sep 20, 2011 at 11:34 AM, weiland, Barbara < bweiland@med.umich.edu mailto:bweiland@med.umich.edu**> wrote:
-----Original Message----- From: freesurfer-bounces@nmr.mgh.**harvard.edufreesurfer-bounces@nmr.mgh.harvard.edu <mailto:freesurfer-bounces@**nmr.mgh.harvard.edufreesurfer-bounces@nmr.mgh.harvard.edu
[mailto:freesurfer-bounces@**nmr.mgh.harvard.edufreesurfer-bounces@nmr.mgh.harvard.edu <mailto:freesurfer-bounces@**nmr.mgh.harvard.edufreesurfer-bounces@nmr.mgh.harvard.edu>] On Behalf Of Douglas N Greve Sent: Wednesday, September 14, 2011 6:10 PM To: Ilana Hairston Cc: freesurfer@nmr.mgh.harvard.edu <mailto:freesurfer@nmr.mgh.**harvard.edufreesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] flipped orientation in tksurfer and tkmedit
When you say on the "right hemi in tkmedit" do you mean on the right side of the image (which is the left side of the brain)? doug
Ilana Hairston wrote:
Hi there, We recently had a problem that tksurfer and tkmedit were flipped relative to each other. Basically, when saving a point in the left hemisphere in tksurfer it it loaded in the right hemisphere in
tkmedit.
Any ideas how this could have happened? Thanks ilana
--
Ilana Hairston ,PhD Research Assistant Professor 4250 Plymouth Rd. (rm 2439) Psychiatry Department, Addiction Research Center University of Michigan, Ann Arbor MI 48109-2700 Tel: 734-232-0232 tel:734-232-0232; Mobile: 650-906-8449
Reminder: Women do 66% of the work worldwide, earn 10% of the
income,
and own 1% of the world's property
------------------------------**------------------------------**
--
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--
Ilana Hairston ,PhD Research Assistant Professor 4250 Plymouth Rd. (rm 2439) Psychiatry Department, Addiction Research Center University of Michigan, Ann Arbor MI 48109-2700 Tel: 734-232-0232; Mobile: 650-906-8449
Reminder: Women do 66% of the work worldwide, earn 10% of the income, and own 1% of the world's property
------------------------------**------------------------------**
______________________________**_________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.**edu/mailman/listinfo/**freesurferhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/**fswiki/BugReportinghttp://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: www.nmr.mgh.harvard.edu/**facility/filedrop/index.htmlhttp://www.nmr.mgh.harvard.edu/facility/filedrop/index.html
--
Ilana Hairston ,PhD Research Assistant Professor 4250 Plymouth Rd. (rm 2439) Psychiatry Department, Addiction Research Center University of Michigan, Ann Arbor MI 48109-2700 Tel: 734-232-0232; Mobile: 650-906-8449
Reminder: Women do 66% of the work worldwide, earn 10% of the income, and own 1% of the world's property