Dear Zheng, Question 1: In the dev version, all labels are rendered by default. In previous versions: it’s probably best to open the file twice, and render the hippo with the range 200-249 and the amygdala with the range 7000-7020. Question 2: open lh.hippoAmygLabels-T1.v2x.mgz instead of lh.hippoAmygLabels-T1.v2x.FS60.mgz Cheers, /Eugenio
-- Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of 郑凤莲 13181786167@163.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Thursday, 1 February 2018 at 07:03 To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] dev version
Hi all experts, I am using freesurfer dev version for segmentation of hippocampus and amydala. I have a doubt about it. 1. In FS 6.0, I can type '203-226' in freeview for viewing subfields of hippocampus. In dev version, When I type 'freeview -v nu.mgz -v lh.hippoAmygLabels-T1.v2x.FS60.mgz:colormap=lut', there are subfields of hippocampus and amydala. How can I view them respectively, and get corresponding colors to every subfield? 2. The hippoSFvolumes.txt shows the volume of body and head of some subfields, such as CA1, CA3. But When I type 'freeview -v nu.mgz -v lh.hippoAmygLabels-T1.v2x.FS60.mgz:colormap=lut', it seems to serve the body and head as a whole. Is there any way to resolve it?
Sincerely, Zheng