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Dear Juan, Thank you for the reply. In the base/tmp directory there is one folder, "hippoSF_T1_long.v22_right" and an empty text file "filled.edits.txt". I don't see any directory pointing to the left hemisphere. In the right hemisphere directory, there are the following files:
T1resampled_0.mgz T1resampled_1.mgz T1resampled_2.mgz asegModBinDilated.mgz asegModBinDilatedResampled.mgz asegModCHA_tp_0.mgz asegModCHA_tp_1.mgz asegModCHA_tp_2.mgz asegMod_tp_0.mgz asegMod_tp_1.mgz asegMod_tp_2.mgz asegRotated_tp_1.mgz asegRotated_tp_2.mgz asmr1.mgz asmr2.mgz asmr3.mgz compressionLookupTable.txt discreteLabelsMergedBodyHeadNoMLorGCDGResampledT1_tp_1.mgz discreteLabelsMergedBodyHeadNoMLorGCDG_tp_1.mgz discreteLabelsMergedBodyHeadResampledT1_tp_1.mgz discreteLabelsMergedBodyHead_tp_1.mgz discreteLabelsMergedBodyHead_tp_2.mgz discreteLabelsResampledT1_tp_1.mgz discreteLabelsWholeBodyHeadResampledT1_tp_1.mgz discreteLabelsWholeBodyHead_tp_1.mgz discreteLabelsWholeBodyHead_tp_2.mgz discreteLabels_all_tp_1.mgz discreteLabels_all_tp_2.mgz discreteLabels_tp_1.mgz discreteLabels_tp_2.mgz hippoAmygBinaryMask.mgz hippoAmygBinaryMask_autoCropped.mgz hippoAmygBinaryMask_autoCropped_opened.mgz hippoAmygBinaryMask_tp_1.mgz hippoAmygBinaryMask_tp_1_autoCropped.mgz hippoAmygBinaryMask_tp_2.mgz hippoAmygBinaryMask_tp_2_autoCropped.mgz hippoMask.mgz hippoMaskDilated.mgz hippoMaskResampled.mgz hippoMaskResampledDilated.mgz imageDump.mgz imageDump_rigidly_coregistered.mgz image_tp_1.mgz image_tp_2.mgz kk2.mgz rigidToAffineBase.lta tp_1_to_base.lta tp_2_to_base.lta trash.lta volumesAmygdala_tp_1.txt volumesAmygdala_tp_2.txt volumesHippo_tp_1.txt volumesHippo_tp_2.txt warpedMeshNoAffine_tp_1.txt.gz warpedMeshNoAffine_tp_2.txt.gz warpedMesh_tp_1.txt.gz warpedMesh_tp_2.txt.gz warpedOriginalMeshBase.txt.gz warpedOriginalMeshTP1.txt.gz warpedOriginalMeshTP2.txt.gz
Hope this helps to potentially make some headway? Thanks very much again in advance. Best regards, Chris
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