I'm getting the following error on several of my subjects during the aparc2aseg stage:
_________________________ #@# AParc-to-ASeg Sat Jun 9 12:19:58 EDT 2007 /disk/eli/freesurfer/conte_flash/5111
mri_aparc2aseg --s 5111 --ribbon
SUBJECTS_DIR /disk/eli/freesurfer/conte_flash subject 5111 outvol /disk/eli/freesurfer/conte_flash/5111/mri/aparc+aseg.mgz useribbon 1 baseoffset 0
Reading lh white surface /disk/eli/freesurfer/conte_flash/5111/surf/lh.white
Building hash of lh white
Reading lh pial surface /disk/eli/freesurfer/conte_flash/5111/surf/lh.pial
Building hash of lh pial ERROR: lh white and pial have a different number of vertices (190233,189041) Linux eli 2.6.9-34.0.1.ELsmp #1 SMP Wed May 17 16:59:36 EDT 2006 x86_64 x86_64 x86_64 GNU/Linux
recon-all exited with ERRORS at Sat Jun 9 12:20:07 EDT 2007 _______________________________
Do I need to reprocess from a certain stage on, or redo the whole thing? What would have caused this (it didn't happen with some other subjects during the same process batch). I couldn't find any info on this in the archive or wiki, I'm running 3.0.4.
Thanks,
Derin