After you ran -autorecon2-wm you skipped a couple of the autorecon3 steps (-pial, -surfvolume, -segstats).
On Tue, 14 Aug 2012, Douglas N Greve wrote:
It means that your subject is out of synch. This usually happens when you've edited a subject and re-run recon-all, but the re-run did not get far enough either because it failed for some reason or you did not run it all the way through to the end. You can run
recon-all -s subject -make all
and it will update your subject and get it back in synch
doug
On 08/14/2012 01:22 PM, Alfredo Damasceno wrote:
Dear Freesurfers,
I've got twice the following error message while pre-smoothing images for qdec (recon-all -qcache):
Reading curvature file /home/alfredo/subjects/vbmRCCT/surf/rh.volume ERROR: number of vertices in /home/alfredo/subjects/vbmRCCT/surf/rh.volume does not match surface (128252,128150) ERROR: reading curvature file Linux tupi.neuroimg.hc.unicamp.br 2.6.35.14-100.fc14.x86_64 #1 SMP Fri Oct 21 18:40:08 UTC 2011 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s vbmRCCT exited with ERRORS at Fri Aug 10 16:06:59 BRT 2012
I am using a Linux-centos4_x86_64 and freesurfer version is 5.1 my SUBJECTS_DIR is /home/alfredo/subjects
Attached is the log.file
Thanks Alfredo
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